Domain ID e3ku1F2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: S-adenosyl-L-methionine-dependent methyltransferases
  • F: TrmK
UID: 001505690
Type: Automatic domain
Parent: e3gnlA1
Range: F:1-163
PDB: 3ku1
PDB Description: SAM-dependent methyltransferase
UniProt: Q97PJ9
Species: Streptococcus pneumoniae

Structure of domain e3ku1F2

Domains in the same chain:

e3ku1F2 F:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1F1 F:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase

Domains in the same PDB:

e3ku1A2 A:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1A1 A:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1B1 B:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1B2 B:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1C1 C:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1C2 C:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1D1 D:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1D2 D:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1E1 E:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1E2 E:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1F2 F:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1F1 F:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1G1 G:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1G2 G:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase
e3ku1H1 H:1-163 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3ku1H2 H:164-193 Long alpha-hairpin Helical hairpin in putative tRNA methyltransferase Helical hairpin in putative tRNA methyltransferase

Structural contacts of domain e3ku1F2 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ku1D2 F:x,y,z->D:X,Y,Z Helical hairpin in putative tRNA methyltransferase Interaction Interface Pymol
e3ku1D1 F:x,y,z->D:X,Y,Z Rossmann-related Interaction Interface Pymol
e3ku1H1 F:-Y+1,X-Y,Z+1->H:x,y,z Rossmann-related Interaction Interface Pymol
e3ku1H1 F:x,y,z->H:X,Y,Z-1 Rossmann-related Interaction Interface Pymol
e3ku1A1 F:x,y,z->A:X,Y,Z-1 Helical hairpin in putative tRNA methyltransferase Interaction Interface Pymol
e3ku1B1 F:x,y,z->B:X,Y,Z-1 Rossmann-related Interaction Interface Pymol