Domain ID e3kvvB1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000389757
Type: Automatic domain
Parent: e3pnpA1
Range: B:3-253
Ligands: R2B SO4 URF
PDB: 3kvv
PDB Description: Uridine phosphorylase
UniProt: P12758
Hsap BLAST neighbor: O95045
Species:

Structure of domain e3kvvB1

Structural contacts of domain e3kvvB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kvvA1 B:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvF1 B:X,Y,Z->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvB1 B:x,y,z->B:-Y+1,X-Y-1,Z-1/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvB1 B:-Y+1,X-Y-1,Z-1/3->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvC1 B:X,Y,Z->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvE1 B:X,Y,Z->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3kvvC1 B:-Y+1,X-Y-1,Z-1/3->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol