Domain ID e3kx2B5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Helicase_C
UID: 000382278
Type: Automatic domain
Parent: e2xauA2
Range: B:271-452
Ligands: ADP MG
PDB: 3kx2
PDB Description: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
UniProt: P53131
Hsap BLAST neighbor: O43143
Species:

Structure of domain e3kx2B5

Domains in the same chain:

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e3kx2B4 B:1-270 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2B5 B:271-452 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2B2 B:453-522 HTH HTH winged
e3kx2B3 B:523-657 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e3kx2B1 B:658-755 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e3kx2A6 A:1-270 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2A5 A:271-452 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2A4 A:453-522 HTH HTH winged
e3kx2A3 A:523-657 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e3kx2A2 A:658-713 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3kx2A1 A:714-755 C-terminal domain in RNA helicases C-terminal domain in RNA helicases C-terminal domain in RNA helicases
e3kx2B4 B:1-270 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2B5 B:271-452 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3kx2B2 B:453-522 HTH HTH winged
e3kx2B3 B:523-657 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e3kx2B1 B:658-755 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Structural contacts of domain e3kx2B5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kx2A6 B:x,y,z->A:Y,X-1,-Z P-loop domains-related Interaction Interface Pymol
e3kx2A1 B:x,y,z->A:Y,X-1,-Z C-terminal domain in RNA helicases Interaction Interface Pymol
e3kx2A5 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3kx2A3 B:x,y,z->A:X,Y,Z Sec63 N-terminal subdomain-like Interaction Interface Pymol