Domain ID e3l4kA2

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: Toprim domain
  • F: Toprim,TOPRIM_C
UID: 001710934
Type: Automatic domain
Parent: e2rgrA6
Range: A:421-561,A:605-693
Ligands: TSP ZN
PDB: 3l4k
PDB Description: DNA topoisomerase 2
UniProt: P06786
Hsap BLAST neighbor: Q02880
Species: Saccharomyces cerevisiae

Structure of domain e3l4kA2

Structural contacts of domain e3l4kA2 of H-group "HAD domain-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3l4kA4 A:x,y,z->A:-X-1,Y,-Z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA1 A:x,y,z->A:-X-1,Y,-Z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA5 A:x,y,z->A:-X-1,Y,-Z HTH Interaction Interface Pymol
e3l4kA5 A:-X-1,Y,-Z->A:x,y,z HTH Interaction Interface Pymol
e3l4kA1 A:-X-1,Y,-Z->A:x,y,z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA4 A:-X-1,Y,-Z->A:x,y,z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA1 A:X-1/2,-Y,-Z-1/2->A:x,y,z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA4 A:X-1/2,-Y,-Z-1/2->A:x,y,z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA4 A:-X-1/2,-Y,Z-1/2->A:x,y,z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA1 A:-X-1/2,-Y,Z-1/2->A:x,y,z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA1 A:X,Y-1,Z->A:x,y,z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e3l4kA2 A:x,y,z->A:-X,Y,-Z HAD domain-related Interaction Interface Pymol
e3l4kA2 A:-X,Y,-Z->A:x,y,z HAD domain-related Interaction Interface Pymol