Domain ID e3l71P2

Download files:
  • A: alpha bundles
  • X: Transmembrane heme-binding four-helical bundle
  • H: Transmembrane heme-binding four-helical bundle
  • T: Transmembrane di-heme cytochromes
  • F: Cytochrome_B
UID: 000382957
Type: Automatic domain
Parent: e1ppjC2
Range: P:2-261
Ligands: AZO BOG CDL GOL HEM PEE UQ
PDB: 3l71
PDB Description: Cytochrome b
UniProt: P18946
Hsap BLAST neighbor: P00156
Species: Gallus gallus

Structure of domain e3l71P2

Domains in the same chain:

e3l71P2 P:2-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e3l71P1 P:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e3l71A1 A:1-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71A2 A:234-444 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71B1 B:20-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71B2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71C2 C:1-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e3l71C1 C:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71D1 D:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e3l71D2 D:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e3l71E2 E:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e3l71E3 E:67-196 ISP domain ISP domain ISP domain
e3l71F1 F:10-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71G1 G:2-81 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71H1 H:9-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71I1 I:28-77 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e3l71J1 J:4-64 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71N1 N:3-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71N2 N:234-444 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71O1 O:18-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71O2 O:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e3l71P2 P:2-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e3l71P1 P:262-380 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71Q1 Q:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e3l71Q2 Q:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e3l71R2 R:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e3l71R3 R:67-196 ISP domain ISP domain ISP domain
e3l71S1 S:10-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71T1 T:2-80 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71U1 U:12-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e3l71W1 W:4-63 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Structural contacts of domain e3l71P2 of H-group "Transmembrane heme-binding four-helical bundle":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3l71Q2 P:X,Y,Z->Q:x,y,z cytochrome c1 transmembrane anchor Interaction Interface Pymol
e3l71Q1 P:X,Y,Z->Q:x,y,z Cytochrome c Interaction Interface Pymol
e3l71S1 P:X,Y,Z->S:x,y,z 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e3l71C2 P:x,y,z->C:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3l71T1 P:X,Y,Z->T:x,y,z Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e3l71T1 P:X,Y,Z->E:x,y,z Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Interaction Interface Pymol
e3l71E2 P:X,Y,Z->E:x,y,z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e3l71R2 P:X,Y,Z->R:x,y,z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol
e3l71N2 P:x,y,z->N:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol