Domain ID e3lj5D1

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  • A: beta barrels
  • X: Barrel domain in upper collar protein
  • H: Barrel domain in upper collar protein
  • T: Barrel domain in upper collar protein
  • F: P22_portal
UID: 000417427
Type: Automatic domain
Parent: e3lj5A2
Range: D:122-318
PDB: 3lj5
PDB Description: Portal protein
UniProt: P26744
Species: Enterobacteria phage P22

Structure of domain e3lj5D1

Domains in the same chain:

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e3lj5D2 D:5-121,D:319-463,D:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5D1 D:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein

Domains in the same PDB:

e3lj5A1 A:5-121,A:319-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5A2 A:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5B2 B:5-121,B:319-463,B:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5B1 B:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5C2 C:5-121,C:319-463,C:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5C1 C:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5D2 D:5-121,D:319-463,D:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5D1 D:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5E2 E:5-121,E:319-463,E:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5E1 E:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5F2 F:5-121,F:319-463,F:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5F1 F:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5G2 G:5-121,G:319-463,G:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5G1 G:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5H2 H:5-121,H:319-463,H:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5H1 H:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5I2 I:5-121,I:319-463,I:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5I1 I:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5J2 J:5-121,J:319-463,J:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5J1 J:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5K2 K:5-121,K:319-463,K:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5K1 K:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein
e3lj5L2 L:5-121,L:319-463,L:493-725 Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein Alpha-helical domain in upper collar protein
e3lj5L1 L:122-318 Barrel domain in upper collar protein Barrel domain in upper collar protein Barrel domain in upper collar protein

Structural contacts of domain e3lj5D1 of H-group "Barrel domain in upper collar protein":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3lj5E2 D:X,Y,Z->E:x,y,z Alpha-helical domain in upper collar protein Interaction Interface Pymol
e3lj5E1 D:X,Y,Z->E:x,y,z Barrel domain in upper collar protein Interaction Interface Pymol
e3lj5C2 D:x,y,z->C:X,Y,Z Alpha-helical domain in upper collar protein Interaction Interface Pymol
e3lj5C1 D:x,y,z->C:X,Y,Z Barrel domain in upper collar protein Interaction Interface Pymol