ECOD: domain e3lkdA2

Domain ID e3lkdA2

A: alpha arrays
X: N-terminal helical domain in restriction-modification system methylation subunit-like
H: N-terminal helical domain in restriction-modification system methylation subunit
T: N-terminal helical domain in restriction-modification system methylation subunit
F: HsdM_N

UID:	001550091
Type:	Automatic domain
Parent:	e3khkA2
Range:	A:6-194
PDB:	3lkd
PDB Description:	Type I restriction-modification system methyltransferase subunit
UniProt:	Q5M500
Species:

Domains in the same chain:

Download Pymol

e3lkdA2	A:6-194	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e3lkdA1	A:195-476	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e3lkdA2	A:6-194	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e3lkdA1	A:195-476	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3lkdB2	B:7-194	N-terminal helical domain in restriction-modification system methylation subunit-like	N-terminal helical domain in restriction-modification system methylation subunit	N-terminal helical domain in restriction-modification system methylation subunit
e3lkdB1	B:195-478	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e3lkdA2 of H-group "N-terminal helical domain in restriction-modification system methylation subunit":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lkdA1	A:x,y,z->A:-X+1,Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3lkdA1	A:-X+1,Y-1/2,-Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3lkdB2	A:x,y,z->B:X-2,Y,Z-1	N-terminal helical domain in restriction-modification system methylation subunit	Interaction Interface Pymol
e3lkdB1	A:x,y,z->B:-X+1,Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3lkdA1	A:x,y,z->A:X-1,Y,Z	Rossmann-related	Interaction Interface Pymol