ECOD: domain e3lmmC5

Domain ID e3lmmC5

A: a+b two layers
X: IF3-like
H: Schlafen 8
T: Schlafen 8
F: SLFN_AlbA_2

UID:	001175657
Type:	Automatic domain
Parent:	e3lmmD1
Range:	C:9-159
Ligands:	CO
PDB:	3lmm
PDB Description:	Uncharacterized protein
UniProt:	Q6NEG3
Species:	Corynebacterium diphtheriae

Domain
In chain context
In PDB context

Structure of domain e3lmmC5

Domains in the same chain:

Download Pymol

e3lmmC5	C:9-159	IF3-like	Schlafen 8	Schlafen 8
e3lmmC4	C:160-411	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	Uncharacterized protein DIP2311 middle domain	Uncharacterized protein DIP2311 middle domain
e3lmmC6	C:412-496	HTH	HTH	winged

Domains in the same PDB:

e3lmmA3	A:9-159	IF3-like	Schlafen 8	Schlafen 8
e3lmmA4	A:160-415	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	Uncharacterized protein DIP2311 middle domain	Uncharacterized protein DIP2311 middle domain
e3lmmA5	A:416-500	HTH	HTH	winged
e3lmmB2	B:9-159	IF3-like	Schlafen 8	Schlafen 8
e3lmmB1	B:160-410	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	Uncharacterized protein DIP2311 middle domain	Uncharacterized protein DIP2311 middle domain
e3lmmB3	B:411-510	HTH	HTH	winged
e3lmmB4	B:511-574	HTH	HTH	winged
e3lmmC5	C:9-159	IF3-like	Schlafen 8	Schlafen 8
e3lmmC4	C:160-411	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	Uncharacterized protein DIP2311 middle domain	Uncharacterized protein DIP2311 middle domain
e3lmmC6	C:412-496	HTH	HTH	winged
e3lmmD1	D:9-159	IF3-like	Schlafen 8	Schlafen 8
e3lmmD2	D:160-410	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	Uncharacterized protein DIP2311 middle domain	Uncharacterized protein DIP2311 middle domain
e3lmmD3	D:411-510	HTH	HTH	winged
e3lmmD4	D:511-575	HTH	HTH	winged

Structural contacts of domain e3lmmC5 of H-group "Schlafen 8":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lmmA5	C:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol
e3lmmA3	C:x,y,z->A:X,Y,Z	Schlafen 8	Interaction Interface Pymol
e3lmmD2	C:X,Y,Z->D:x,y,z	Uncharacterized protein DIP2311 middle domain	Interaction Interface Pymol
e3lmmA4	C:x,y,z->A:-X,Y-1/2,-Z+1	Uncharacterized protein DIP2311 middle domain	Interaction Interface Pymol