ECOD: domain e3lpfA6

Domain ID e3lpfA6

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Glyco_hydro_2_C

UID:	001208929
Type:	Automatic domain
Parent:	e1jz8A5
Range:	A:268-601
Ligands:	Z77
PDB:	3lpf
PDB Description:	Beta-glucuronidase
UniProt:	P05804
Hsap BLAST neighbor:	P08236
Species:

Domain
In chain context
In PDB context

Structure of domain e3lpfA6

Domains in the same chain:

Download Pymol

e3lpfA1	A:-1-181	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e3lpfA2	A:182-273	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3lpfA6	A:268-601	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

Structural contacts of domain e3lpfA6 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lpfB6	A:X,Y,Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e3lpfB1	A:X,Y,Z->B:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e3lpfB1	A:-X,Y,-Z->B:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e3lpfB6	A:-X,Y,-Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e3lpfA6	A:x,y,z->A:-X,Y,-Z	TIM barrels	Interaction Interface Pymol
e3lpfA6	A:-X,Y,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol
e3lpfA6	A:x,y,z->A:-X-1/2,Y-1/2,-Z	TIM barrels	Interaction Interface Pymol
e3lpfA6	A:-X-1/2,Y-1/2,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol
e3lpfA1	A:-X-1/2,Y-1/2,-Z->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol