| UID: | 001248361 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1uasA2 |
| Range: | D:19-319,D:400-441 |
| Ligands: | NAG |
| PDB: | 3lrm |
| PDB Description: | Alpha-galactosidase 1 |
| UniProt: | P04824 |
| Hsap BLAST neighbor: | P17050 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e3lrmD3
Domains in the same chain:
| e3lrmD3 | D:19-319,D:400-441 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3lrmD4 | D:320-399,D:442-470 | Glycosyl hydrolase domain-like | Glycosyl hydrolase domain | Glycosyl hydrolase domain |
Domains in the same PDB:
| e3lrmA2 | A:19-319,A:402-439 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3lrmA1 | A:320-401,A:440-470 | Glycosyl hydrolase domain-like | Glycosyl hydrolase domain | Glycosyl hydrolase domain |
| e3lrmB3 | B:19-319,B:400-441 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3lrmB4 | B:320-399,B:442-470 | Glycosyl hydrolase domain-like | Glycosyl hydrolase domain | Glycosyl hydrolase domain |
| e3lrmC3 | C:19-319,C:400-441 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3lrmC4 | C:320-399,C:442-470 | Glycosyl hydrolase domain-like | Glycosyl hydrolase domain | Glycosyl hydrolase domain |
| e3lrmD3 | D:19-319,D:400-441 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3lrmD4 | D:320-399,D:442-470 | Glycosyl hydrolase domain-like | Glycosyl hydrolase domain | Glycosyl hydrolase domain |
Structural contacts of domain e3lrmD3 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3lrmC3 | D:x,y,z->C:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e3lrmA2 | D:x,y,z->A:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e3lrmA1 | D:x,y,z->A:X,Y,Z | Glycosyl hydrolase domain | Interaction Interface Pymol |
| e3lrmD3 | D:x,y,z->D:X-1/2,-Y-1/2,-Z | TIM barrels | Interaction Interface Pymol |
| e3lrmD4 | D:x,y,z->D:X-1/2,-Y-1/2,-Z | Glycosyl hydrolase domain | Interaction Interface Pymol |
| e3lrmD3 | D:X-1/2,-Y-1/2,-Z->D:x,y,z | TIM barrels | Interaction Interface Pymol |
| e3lrmB4 | D:x,y,z->B:-X-1/2,-Y,Z-1/2 | Glycosyl hydrolase domain | Interaction Interface Pymol |
