Domain ID e3lsqA3

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA-synt_2b
UID: 001130114
Type: Automatic domain
Parent: e1qf6A3
Range: A:146-466
Ligands: MLI NA
PDB: 3lsq
PDB Description: Seryl-tRNA synthetase
UniProt: Q384V4
Hsap BLAST neighbor: P49591
Species: Trypanosoma brucei

Structure of domain e3lsqA3

Structural contacts of domain e3lsqA3 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3lsqB2 A:X,Y,Z->B:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqB1 A:X-Y+1/3,-Y+2/3,-Z+2/3->B:x,y,z tRNA-binding arm Interaction Interface Pymol
e3lsqB2 A:X-Y+1/3,-Y+2/3,-Z+2/3->B:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqB2 A:Y,X,-Z+1->B:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqA3 A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqA3 A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqB1 A:x,y,z->B:Y-2/3,X-1/3,-Z+2/3 tRNA-binding arm Interaction Interface Pymol
e3lsqA3 A:x,y,z->A:-Y,X-Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqA3 A:-Y,X-Y,Z->A:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3lsqB2 A:-Y,X-Y,Z->B:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol