ECOD: domain e3lvuA1

Domain ID e3lvuA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_5

UID:	000119472
Type:	Manual and representative domain
Range:	A:311-568
Ligands:	GOL IOD
PDB:	3lvu
PDB Description:	ABC transporter, periplasmic substrate-binding protein
UniProt:	Q5LRQ9
Species:	Ruegeria pomeroyi

Domains in the same chain:

Download Pymol

e3lvuA1	A:311-568	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3lvuA1	A:311-568	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3lvuB1	B:312-568	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3lvuC1	C:311-568	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3lvuD1	D:311-568	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3lvuA1 of H-group "Periplasmic binding protein-like II":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lvuC1	A:x,y,z->C:X-1,Y,Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuB1	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuB1	A:x,y,z->B:X-1,Y,Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuD1	A:X,Y,Z->D:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuD1	A:X,Y-1,Z->D:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuC1	A:X,Y,Z-1->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuB1	A:X,Y,Z-1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuC1	A:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3lvuD1	A:X-1,Y,Z->D:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol