ECOD: domain e3lwvB1

Domain ID e3lwvB1

A: few secondary structure elements
X: Rubredoxin-like
H: Nucleolar RNA-binding protein Nop10-like
T: Nucleolar RNA-binding protein Nop10-like
F: Nop10p

UID:	000395135
Type:	Automatic domain
Parent:	e2aqaA1
Range:	B:3-55
Ligands:	ZN
PDB:	3lwv
PDB Description:	RIBOSOME BIOGENESIS PROTEIN NOP10
UniProt:	Q8U1R4
Species:	Pyrococcus furiosus

Domain
In chain context
In PDB context

Structure of domain e3lwvB1

Domains in the same chain:

Download Pymol

e3lwvB1	B:3-55	Rubredoxin-like	Nucleolar RNA-binding protein Nop10-like	Nucleolar RNA-binding protein Nop10-like

Domains in the same PDB:

e3lwvA2	A:11-251	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase
e3lwvA1	A:252-337	cradle loop barrel	RIFT-related	PUA domain
e3lwvB1	B:3-55	Rubredoxin-like	Nucleolar RNA-binding protein Nop10-like	Nucleolar RNA-binding protein Nop10-like
e3lwvC1	C:4-123	Bacillus chorismate mutase-like	L30e-like	L30e-like

Structural contacts of domain e3lwvB1 of H-group "Nucleolar RNA-binding protein Nop10-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lwvA2	B:x,y,z->A:X,Y,Z	Pseudouridine synthase	Interaction Interface Pymol
e3lwvC1	B:X,Y,Z->C:x,y,z	L30e-like	Interaction Interface Pymol
e3lwvA2	B:-X+1/2,Y-1/2,-Z->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e3lwvA2	B:x,y,z->A:-X+1/2,Y-1/2,-Z	Pseudouridine synthase	Interaction Interface Pymol