ECOD: domain e3m0cC8

Domain ID e3m0cC8

A: few secondary structure elements
X: EGF-like
H: LDL receptor-like module
T: LDL receptor-like module
F: Ldl_recept_a

UID:	001149555
Type:	Automatic domain
Parent:	e2fcwB1
Range:	C:255-293
Ligands:	CA
PDB:	3m0c
PDB Description:	Low-density lipoprotein receptor
UniProt:	P01130
Hsap BLAST neighbor:	P01130
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3m0cC8

Domains in the same chain:

Download Pymol

e3m0cC8	C:255-293	EGF-like	LDL receptor-like module	LDL receptor-like module
e3m0cC7	C:293-332	EGF-like	EGF-related	EGF/Laminin
e3m0cC9	C:333-373	EGF-like	EGF-related	EGF/Laminin
e3m0cC6	C:374-642	beta-propeller-like	beta-propeller	6-bladed
e3m0cC2	C:643-692	EGF-like	EGF-related	EGF/Laminin

Domains in the same PDB:

e3m0cA2	A:61-152	Alpha-beta plaits	Protease propeptides/inhibitors	Protease propeptides/inhibitors
e3m0cB1	B:153-431	Subtilisin-like	Subtilisin-like	Subtilisin-like
e3m0cB4	B:450-530	Resistin	Resistin	Resistin
e3m0cB5	B:531-604	Resistin	Resistin	Resistin
e3m0cB2	B:605-682	Resistin	Resistin	Resistin
e3m0cC8	C:255-293	EGF-like	LDL receptor-like module	LDL receptor-like module
e3m0cC7	C:293-332	EGF-like	EGF-related	EGF/Laminin
e3m0cC9	C:333-373	EGF-like	EGF-related	EGF/Laminin
e3m0cC6	C:374-642	beta-propeller-like	beta-propeller	6-bladed
e3m0cC2	C:643-692	EGF-like	EGF-related	EGF/Laminin

Structural contacts of domain e3m0cC8 of H-group "LDL receptor-like module":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3m0cB2	C:x,y,z->B:-Y,X-Y-1,Z-1/3	Resistin	Interaction Interface Pymol
e3m0cB4	C:x,y,z->B:-Y,X-Y-1,Z-1/3	Resistin	Interaction Interface Pymol
e3m0cB1	C:x,y,z->B:-Y,X-Y-1,Z-1/3	Subtilisin-like	Interaction Interface Pymol