ECOD: domain e3m4pD1

Domain ID e3m4pD1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	000387357
Type:	Automatic domain
Parent:	e1b8aA1
Range:	D:11-117
Ligands:	SO4
PDB:	3m4p
PDB Description:	Asparaginyl-tRNA synthetase, putative
UniProt:	C4LWW8
Hsap BLAST neighbor:	O43776
Species:	Entamoeba histolytica

Domain
In chain context
In PDB context

Structure of domain e3m4pD1

Domains in the same chain:

Download Pymol

e3m4pD1	D:11-117	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3m4pD2	D:118-451	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Domains in the same PDB:

e3m4pA1	A:11-117	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3m4pA2	A:118-451	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3m4pB1	B:11-117	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3m4pB2	B:118-451	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3m4pC1	C:11-114	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3m4pC2	C:115-451	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3m4pD1	D:11-117	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3m4pD2	D:118-451	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Structural contacts of domain e3m4pD1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3m4pC2	D:x,y,z->C:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3m4pC2	D:x,y,z->C:-X,Y-1/2,-Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol