| UID: | 001840986 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:1-879 |
| Ligands: | 1PE K |
| PDB: | 3m62 |
| PDB Description: | Ubiquitin conjugation factor E4 |
| UniProt: | P54860 |
| Hsap BLAST neighbor: | O95155 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e3m62A1
Domains in the same chain:
| e3m62A1 | A:1-879 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e3m62A2 | A:880-955 | RING/U-box-like | RING/U-box-like | RING/U-box |
Domains in the same PDB:
| e3m62A1 | A:1-879 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e3m62A2 | A:880-955 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e3m62B1 | B:3-74 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Structural contacts of domain e3m62A1 of H-group "ARM repeat":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3m62A1 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | ARM repeat | Interaction Interface Pymol |
| e3m62A1 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3m62A2 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | RING/U-box-like | Interaction Interface Pymol |
| e3m62A1 | A:x,y,z->A:-X+1/2,-Y,Z-1/2 | ARM repeat | Interaction Interface Pymol |
| e3m62A2 | A:x,y,z->A:-X+1/2,-Y,Z-1/2 | RING/U-box-like | Interaction Interface Pymol |
| e3m62A1 | A:-X+1/2,-Y,Z-1/2->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3m62B1 | A:X,Y,Z->B:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e3m62A1 | A:x,y,z->A:-X+3/2,-Y,Z-1/2 | ARM repeat | Interaction Interface Pymol |
| e3m62A1 | A:-X+3/2,-Y,Z-1/2->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3m62B1 | A:X-1/2,-Y-1/2,-Z-1->B:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e3m62A2 | A:X-1,Y,Z->A:x,y,z | RING/U-box-like | Interaction Interface Pymol |
