ECOD: domain e3m6pA1

Domain ID e3m6pA1

A: a+b complex topology
X: Peptide deformylase
H: Peptide deformylase
T: Peptide deformylase
F: Pep_deformylase

UID:	000416155
Type:	Automatic domain
Parent:	e1xeoA1
Range:	A:1-180
Ligands:	BB2 ZN
PDB:	3m6p
PDB Description:	PEPTIDE DEFORMYLASE 1B
UniProt:	Q9FUZ2
Hsap BLAST neighbor:	Q9HBH1
Species:	Arabidopsis thaliana

Domains in the same chain:

Download Pymol

e3m6pA1	A:1-180	Peptide deformylase	Peptide deformylase	Peptide deformylase

Domains in the same PDB:

e3m6pA1	A:1-180	Peptide deformylase	Peptide deformylase	Peptide deformylase
e3m6pB1	B:1-180	Peptide deformylase	Peptide deformylase	Peptide deformylase

Structural contacts of domain e3m6pA1 of H-group "Peptide deformylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3m6pB1	A:X,Y,Z->B:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3m6pB1	A:x,y,z->B:-X+1,Y-1/2,-Z+1/2	Peptide deformylase	Interaction Interface Pymol
e3m6pB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	Peptide deformylase	Interaction Interface Pymol
e3m6pA1	A:x,y,z->A:-X,Y-1/2,-Z+1/2	Peptide deformylase	Interaction Interface Pymol
e3m6pA1	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3m6pA1	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	Peptide deformylase	Interaction Interface Pymol
e3m6pA1	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	Peptide deformylase	Interaction Interface Pymol