ECOD: domain e3m6zA2

Domain ID e3m6zA2

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: Topo-V_HhH_2_2nd,SAM_5

UID:	001761243
Type:	Automatic domain
Parent:	e3m6kA2
Range:	A:294-375
Ligands:	MG PO4
PDB:	3m6z
PDB Description:	TOPOISOMERASE V
UniProt:	Q977W1
Species:

Domain
In chain context
In PDB context

Structure of domain e3m6zA2

Domains in the same chain:

Download Pymol

e3m6zA1	A:4-179	Topoisomerase V catalytic domain-like	Topoisomerase V catalytic domain-like	Topoisomerase V catalytic domain-like
e3m6zA3	A:180-293	HTH	HTH	tri-helical
e3m6zA2	A:294-375	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

Structural contacts of domain e3m6zA2 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3m6kA2	A:x,y,z->B:-X+2,Y-1/2,-Z+1/2	SAM/DNA-glycosylase	Interaction Interface Pymol
e3m6kA2	A:x,y,z->B:-X+2,Y-1/2,-Z+1/2	SAM/DNA-glycosylase	Interaction Interface Pymol
e3m6kA2	A:x,y,z->B:-X+2,Y-1/2,-Z+1/2	SAM/DNA-glycosylase	Interaction Interface Pymol
e3m6kA2	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	SAM/DNA-glycosylase	Interaction Interface Pymol
e3m6kA2	A:x,y,z->B:X-1/2,-Y+3/2,-Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e3m6kA2	A:x,y,z->B:X,Y-1,Z	SAM/DNA-glycosylase	Interaction Interface Pymol