Domain ID e3mbeA2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000390993
Type: Automatic domain
Parent: e1hdmA2
Range: A:1B-81
PDB: 3mbe
PDB Description: MHC CLASS II H2-IAg7 ALPHA CHAIN
UniProt: P04228
Hsap BLAST neighbor: P01906
Species: Mus musculus

Structure of domain e3mbeA2

Domains in the same chain:

e3mbeA2 A:1B-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3mbeA1 A:82-182 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3mbeA2 A:1B-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3mbeA1 A:82-182 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeB2 B:5-94A MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3mbeB1 B:94A-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeC1 C:2-127 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeC2 C:128-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeD1 D:3-130 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeD2 D:131-252 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeE2 E:1B-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3mbeE1 E:82-182 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeF2 F:5-94A MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3mbeF1 F:94A-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeG1 G:2-127 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeG2 G:128-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeH1 H:3-130 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mbeH2 H:131-252 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3mbeA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 A:X,Y,Z->B:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e3mbeB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mbeD1 A:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mbeC1 A:X,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mbeF1 A:-X,Y-1/2,-Z-1/2->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mbeE1 A:x,y,z->E:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol