Domain ID e3mdcA5

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000389991
Type: Automatic domain
Parent: e2fmpA3
Range: A:376-575
Ligands: GTF MG NA
PDB: 3mdc
PDB Description: DNA polymerase lambda
UniProt: Q9UGP5
Hsap BLAST neighbor: Q9UGP5
Species: Homo sapiens

Structure of domain e3mdcA5

Structural contacts of domain e3mdcA5 of H-group "Nucleotidyltransferase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mdcA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3mdcA2 A:X,Y-1,Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3mdcA1 A:X,Y-1,Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3mdcA2 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol