Domain ID e3meeB2

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 000391043
Type: Automatic domain
Parent: e1ztwA1
Range: B:6-236
Ligands: SO4 T27
PDB: 3mee
PDB Description: p51 Reverse transcriptase
UniProt: P04585
Hsap BLAST neighbor: P63135
Species:

Structure of domain e3meeB2

Domains in the same chain:

Download Pymol

e3meeB2 B:6-236 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3meeB1 B:237-310 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3meeB3 B:311-429 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e3meeA8 A:1-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3meeA7 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3meeA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3meeA6 A:429-552 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3meeB2 B:6-236 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3meeB1 B:237-310 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3meeB3 B:311-429 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3meeB2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3meeA8 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3meeA5 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3meeA5 B:X-1/2,-Y+1/2,-Z->A:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3meeA8 B:x,y,z->A:-X+1/2,-Y+1/2,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol