Domain ID e3megB3

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: RNaseH-like domain in reverse transcriptase
  • T: RNaseH-like domain in reverse transcriptase
  • F: RVT_connect
UID: 000391051
Type: Automatic domain
Parent: e2zd1B3
Range: B:312-429
PDB: 3meg
PDB Description: p51 Reverse transcriptase
UniProt: P04585
Species:

Structure of domain e3megB3

Domains in the same chain:

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e3megB2 B:6-237 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3megB1 B:238-311 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3megB3 B:312-429 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e3megA8 A:1-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3megA7 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3megA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3megA6 A:429-552 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3megB2 B:6-237 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3megB1 B:238-311 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3megB3 B:312-429 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3megB3 of H-group "RNaseH-like domain in reverse transcriptase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3megA6 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3megA5 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3megA8 B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3megA6 B:x,y,z->A:-X,Y,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol
e3megB3 B:x,y,z->B:X,-Y+1,-Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3megB3 B:X,-Y+1,-Z->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol