Domain ID e3mjkY1

Download files:
  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF,PDGF_N
UID: 000393521
Type: Automatic domain
Parent: e3mjkA1
Range: Y:23-55,Y:87-182
PDB: 3mjk
PDB Description: PLATELET-DERIVED GROWTH FACTOR SUBUNIT A
UniProt: P04085
Hsap BLAST neighbor: P04085
Species: Homo sapiens

Structure of domain e3mjkY1

Structural contacts of domain e3mjkY1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mjkX1 Y:x,y,z->X:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3mjkE1 Y:x,y,z->E:-X+1,Y-1/2,-Z+1/2 Cystine-knot cytokines Interaction Interface Pymol
e3mjkX1 Y:X-1/2,-Y+1/2,-Z->X:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3mjkA1 Y:x,y,z->A:-X,Y-1/2,-Z+1/2 Cystine-knot cytokines Interaction Interface Pymol
e3mjkE1 Y:x,y,z->E:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3mjkY1 Y:x,y,z->Y:X-1/2,-Y+1/2,-Z Cystine-knot cytokines Interaction Interface Pymol
e3mjkY1 Y:X-1/2,-Y+1/2,-Z->Y:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3mjkA1 Y:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Cystine-knot cytokines Interaction Interface Pymol
e3mjkB1 Y:x,y,z->B:-X,Y-1/2,-Z+1/2 Cystine-knot cytokines Interaction Interface Pymol
e3mjkF1 Y:x,y,z->F:X-1/2,-Y+1/2,-Z Cystine-knot cytokines Interaction Interface Pymol
e3mjkF1 Y:x,y,z->F:-X+1,Y-1/2,-Z+1/2 Cystine-knot cytokines Interaction Interface Pymol