| UID: | 000393521 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3mjkA1 |
| Range: | Y:23-55,Y:87-182 |
| PDB: | 3mjk |
| PDB Description: | PLATELET-DERIVED GROWTH FACTOR SUBUNIT A |
| UniProt: | P04085 |
| Hsap BLAST neighbor: | P04085 |
| Species: | Homo sapiens |
Structure of domain e3mjkY1
Domains in the same chain:
| e3mjkY1 | Y:23-55,Y:87-182 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
Domains in the same PDB:
| e3mjkA1 | A:22-53,A:83-180 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3mjkB1 | B:23-50,B:87-182 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3mjkE1 | E:23-50,E:87-180 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3mjkF1 | F:23-50,F:87-183 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3mjkX1 | X:23-49,X:88-181 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3mjkY1 | Y:23-55,Y:87-182 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
Structural contacts of domain e3mjkY1 of H-group "Cystine-knot cytokines":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3mjkX1 | Y:x,y,z->X:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkE1 | Y:x,y,z->E:-X+1,Y-1/2,-Z+1/2 | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkX1 | Y:X-1/2,-Y+1/2,-Z->X:x,y,z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkA1 | Y:x,y,z->A:-X,Y-1/2,-Z+1/2 | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkE1 | Y:x,y,z->E:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkY1 | Y:x,y,z->Y:X-1/2,-Y+1/2,-Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkY1 | Y:X-1/2,-Y+1/2,-Z->Y:x,y,z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkA1 | Y:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkB1 | Y:x,y,z->B:-X,Y-1/2,-Z+1/2 | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkF1 | Y:x,y,z->F:X-1/2,-Y+1/2,-Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3mjkF1 | Y:x,y,z->F:-X+1,Y-1/2,-Z+1/2 | Cystine-knot cytokines | Interaction Interface Pymol |
