Domain ID e3mmpG1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RNA_replicase_B
UID: 001311183
Type: Automatic and representative domain
Range: G:7-385
Ligands: PXN
PDB: 3mmp
PDB Description: RNA-directed RNA polymerase beta chain
UniProt: P14647
Species: Enterobacteria phage Qbeta

Structure of domain e3mmpG1

Domains in the same chain:

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e3mmpG1 G:7-385 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3mmpG2 G:386-573 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e3mmpA5 A:3-54 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e3mmpA4 A:55-139 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e3mmpA2 A:140-282 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e3mmpA3 A:1009-1041,A:1064-1201 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3mmpA7 A:1202-1300 cradle loop barrel RIFT-related Alanine racemase-C
e3mmpA6 A:1301-1393 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3mmpC11 C:3-54 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e3mmpC10 C:55-139 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e3mmpC7 C:140-282 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e3mmpC2 C:1009-1041,C:1064-1201 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3mmpC5 C:1202-1300 cradle loop barrel RIFT-related Alanine racemase-C
e3mmpC4 C:1301-1393 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3mmpF1 F:7-385 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3mmpF2 F:386-573 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3mmpG1 G:7-385 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3mmpG2 G:386-573 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e3mmpG1 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mmpA2 G:x,y,z->A:X,Y,Z Elongation factor Ts (EF-Ts), dimerisation domain Interaction Interface Pymol
e3mmpA7 G:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e3mmpG2 G:x,y,z->G:-X+1/2,Y-1/2,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3mmpC5 G:x,y,z->C:X,Y,Z-1 RIFT-related Interaction Interface Pymol