Domain ID e3mv125

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000414967
Type: Automatic domain
Parent: e1jz8A5
Range: 2:334-625
Ligands: DMS GAI MG NA
PDB: 3mv1
PDB Description: Beta-galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species:

Structure of domain e3mv125

Domains in the same chain:

Download Pymol

e3mv121 2:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3mv122 2:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv125 2:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3mv123 2:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv124 2:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e3mv111 1:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3mv112 1:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv115 1:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3mv113 1:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv114 1:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3mv121 2:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3mv122 2:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv125 2:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3mv123 2:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv124 2:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3mv131 3:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3mv132 3:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv135 3:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3mv133 3:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv134 3:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3mv141 4:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3mv142 4:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv145 4:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3mv143 4:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3mv144 4:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e3mv125 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mv132 2:X,Y,Z->3:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mv131 2:X,Y,Z->3:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e3mv135 2:X,Y,Z->3:x,y,z TIM barrels Interaction Interface Pymol
e3mv115 2:x,y,z->1:X,Y,Z TIM barrels Interaction Interface Pymol
e3mv134 2:X-1/2,-Y-1/2,-Z+1->3:x,y,z supersandwich Interaction Interface Pymol
e3mv135 2:X-1/2,-Y-1/2,-Z+1->3:x,y,z TIM barrels Interaction Interface Pymol