ECOD: domain e3n40P1

Domain ID e3n40P1

A: a+b two layers
X: Glycoprotein E3
H: Glycoprotein E3
T: Glycoprotein E3
F: Alpha_E3_glycop

UID:	000185418
Type:	Manual and representative domain
Range:	P:5-71
Ligands:	ACT NAG
PDB:	3n40
PDB Description:	P62 ENVELOPE GLYCOPROTEIN
UniProt:	Q1H8W5
Species:	Chikungunya virus

Domain
In chain context
In PDB context

Structure of domain e3n40P1

Domains in the same chain:

Download Pymol

e3n40P1	P:5-71	Glycoprotein E3	Glycoprotein E3	Glycoprotein E3
e3n40P2	P:72-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3n40P3	P:203-333	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3n40P4	P:334-405	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3n40F2	F:-1-292	Viral glycoprotein, central and dimerisation domains-like	Viral glycoprotein, central and dimerisation domains	Viral glycoprotein, central and dimerisation domains
e3n40F1	F:293-391	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3n40P1	P:5-71	Glycoprotein E3	Glycoprotein E3	Glycoprotein E3
e3n40P2	P:72-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3n40P3	P:203-333	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3n40P4	P:334-405	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3n40P1 of H-group "Glycoprotein E3":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3n40P2	P:x,y,z->P:X-1,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e3n40P3	P:x,y,z->P:X-1,Y,Z	Immunoglobulin-related	Interaction Interface Pymol