ECOD: domain e3n9mA2

Domain ID e3n9mA2

A: beta sandwiches
X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: JmjC

UID:	001682767
Type:	Automatic domain
Parent:	e2xueA1
Range:	A:288-585
Ligands:	FE2
PDB:	3n9m
PDB Description:	Putative uncharacterized protein
UniProt:	Q9GYI0
Hsap BLAST neighbor:	Q9UPP1
Species:	Caenorhabditis elegans

Domain
In chain context
In PDB context

Structure of domain e3n9mA2

Domains in the same chain:

Download Pymol

e3n9mA3	A:193-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3n9mA2	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3n9mA1	A:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Domains in the same PDB:

e3n9mA3	A:193-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3n9mA2	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3n9mA1	A:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e3n9mC2	C:193-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3n9mC1	C:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3n9mC3	C:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Structural contacts of domain e3n9mA2 of H-group "Double-stranded beta-helix":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3n9mA3	A:x,y,z->A:-X,Y-1/2,-Z+1	RING/U-box-like	Interaction Interface Pymol