ECOD: domain e3nemB1

Domain ID e3nemB1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	000396932
Type:	Automatic domain
Parent:	e1b8aA1
Range:	B:1-103
PDB:	3nem
PDB Description:	ASPARTYL-TRNA SYNTHETASE
UniProt:	Q52428
Species:	Thermococcus kodakarensis

Domain
In chain context
In PDB context

Structure of domain e3nemB1

Domains in the same chain:

Download Pymol

e3nemB1	B:1-103	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3nemB2	B:104-438	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Domains in the same PDB:

e3nemA1	A:1-103	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3nemA2	A:104-438	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3nemB1	B:1-103	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3nemB2	B:104-438	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Structural contacts of domain e3nemB1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3nemA2	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3nemA2	B:x,y,z->A:X-1/2,-Y+1/2,-Z+1	Class II aaRS and biotin synthetases	Interaction Interface Pymol