Domain ID e3nifD4

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  • A: few secondary structure elements
  • X: EGF-like
  • H: EGF-related
  • T: EGF/Laminin
  • F: I-EGF_1
UID: 001658061
Type: Automatic domain
Parent: e2p28B1
Range: D:441-467
Ligands: SO4
PDB: 3nif
PDB Description: INTEGRIN BETA-3
UniProt: P05106
Hsap BLAST neighbor: P05106
Species: Homo sapiens

Structure of domain e3nifD4

Domains in the same chain:

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e3nifD3 D:1-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3nifD1 D:58-106,D:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifD2 D:107-354 HAD domain-like HAD domain-related vWA-like
e3nifD4 D:441-467 EGF-like EGF-related EGF/Laminin

Domains in the same PDB:

e3nifA1 A:1-454 beta-propeller-like beta-propeller 7-bladed
e3nifB3 B:1-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3nifB1 B:58-106,B:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifB2 B:107-354 HAD domain-like HAD domain-related vWA-like
e3nifC1 C:1-453 beta-propeller-like beta-propeller 7-bladed
e3nifD3 D:1-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3nifD1 D:58-106,D:355-440 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifD2 D:107-354 HAD domain-like HAD domain-related vWA-like
e3nifD4 D:441-467 EGF-like EGF-related EGF/Laminin
e3nifE2 E:1-119 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifE1 E:120-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifF1 F:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifF2 F:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifH2 H:1-119 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifH1 H:120-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifL1 L:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3nifL2 L:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3nifD4 of H-group "EGF-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nifA1 D:X,Y,Z-1->A:x,y,z beta-propeller Interaction Interface Pymol