| UID: | 000400192 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3ny2A1 |
| Range: | D:113-194 |
| Ligands: | ZN |
| PDB: | 3nik |
| PDB Description: | E3 ubiquitin-protein ligase UBR1 |
| UniProt: | P19812 |
| Hsap BLAST neighbor: | Q8IWV7 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e3nikD1
Domains in the same chain:
| e3nikD1 | D:113-194 | B-box zinc-binding domain-like | UBR box | UBR box |
Domains in the same PDB:
| e3nikA1 | A:113-194 | B-box zinc-binding domain-like | UBR box | UBR box |
| e3nikB1 | B:113-194 | B-box zinc-binding domain-like | UBR box | UBR box |
| e3nikD1 | D:113-194 | B-box zinc-binding domain-like | UBR box | UBR box |
| e3nikF1 | F:115-194 | B-box zinc-binding domain-like | UBR box | UBR box |
Structural contacts of domain e3nikD1 of H-group "UBR box":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3nikA1 | D:x,y,z->A:X,Y,Z | UBR box | Interaction Interface Pymol |
| e3nikA1 | D:x,y,z->A:X-1,Y,Z | UBR box | Interaction Interface Pymol |
| e3nikB1 | D:-Y,X-Y+2,Z-1/3->B:x,y,z | UBR box | Interaction Interface Pymol |
| e3nikB1 | D:-Y,X-Y+1,Z-1/3->B:x,y,z | UBR box | Interaction Interface Pymol |
| e3nikB1 | D:x,y,z->B:X,Y,Z | UBR box | Interaction Interface Pymol |
