ECOD: domain e3nk7B4

Domain ID e3nk7B4

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: SpoU_methylase

UID:	001169376
Type:	Automatic domain
Parent:	e1mxiA1
Range:	B:101-271
Ligands:	SAM
PDB:	3nk7
PDB Description:	23S RRNA METHYLTRANSFERASE
UniProt:	P52391
Species:	Streptomyces actuosus

Domains in the same chain:

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e3nk7B3	B:5-100	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3nk7B4	B:101-271	alpha/beta knot	alpha/beta knot	alpha/beta knot

Domains in the same PDB:

e3nk7A1	A:1-98	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3nk7A2	A:99-274	alpha/beta knot	alpha/beta knot	alpha/beta knot
e3nk7B3	B:5-100	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3nk7B4	B:101-271	alpha/beta knot	alpha/beta knot	alpha/beta knot

Structural contacts of domain e3nk7B4 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3nk7A2	B:x,y,z->A:X,Y,Z	alpha/beta knot	Interaction Interface Pymol
e3nk7B4	B:x,y,z->B:-X,Y-1/2,-Z	alpha/beta knot	Interaction Interface Pymol
e3nk7B3	B:-X,Y-1/2,-Z->B:x,y,z	L30e-like	Interaction Interface Pymol
e3nk7B4	B:-X,Y-1/2,-Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e3nk7A1	B:x,y,z->A:X-1,Y,Z	L30e-like	Interaction Interface Pymol
e3nk7A2	B:x,y,z->A:X-1,Y,Z	alpha/beta knot	Interaction Interface Pymol
e3nk7A1	B:-X,Y-1/2,-Z->A:x,y,z	L30e-like	Interaction Interface Pymol
e3nk7A1	B:-X+1,Y-1/2,-Z->A:x,y,z	L30e-like	Interaction Interface Pymol