ECOD: domain e3nl3D1

Domain ID e3nl3D1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Ribokinase-like
T: Ribokinase-like
F: HK

UID:	001311223
Type:	Automatic domain
Parent:	e1ekqA1
Range:	D:223-540
Ligands:	MG
PDB:	3nl3
PDB Description:	Thiamine biosynthetic bifunctional enzyme
UniProt:	Q6FV03
Species:	Candida glabrata

Domain
In chain context
In PDB context

Structure of domain e3nl3D1

Domains in the same chain:

Download Pymol

e3nl3D2	D:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3D1	D:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like

Domains in the same PDB:

e3nl3A4	A:2-231	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3A3	A:232-540	Rossmann-like	Ribokinase-like	Ribokinase-like
e3nl3B2	B:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3B1	B:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like
e3nl3C2	C:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3C1	C:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like
e3nl3D2	D:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3D1	D:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like
e3nl3E2	E:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3E1	E:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like
e3nl3F2	F:2-222	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nl3F1	F:223-540	Rossmann-like	Ribokinase-like	Ribokinase-like

Structural contacts of domain e3nl3D1 of H-group "Ribokinase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3nl3B1	D:x,y,z->B:X,Y,Z	Ribokinase-like	Interaction Interface Pymol
e3nl3C1	D:x,y,z->C:X,Y,Z	Ribokinase-like	Interaction Interface Pymol
e3nl3B1	D:-X+1,Y-1/2,-Z->B:x,y,z	Ribokinase-like	Interaction Interface Pymol
e3nl3C2	D:-X,Y-1/2,-Z->C:x,y,z	TIM barrels	Interaction Interface Pymol