ECOD: domain e3ns6A1

Domain ID e3ns6A1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	000140906
Type:	Automatic domain
Parent:	e1nu4A1
Range:	A:71-169
Ligands:	SO4
PDB:	3ns6
PDB Description:	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B
UniProt:	P06103
Hsap BLAST neighbor:	P55884
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e3ns6A1	A:71-169	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e3ns6A1	A:71-169	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3ns6B1	B:71-169	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e3ns6A1 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ns6B1	A:X,Y,Z->B:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:x,y,z->B:X-1,Y,Z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:x,y,z->B:X-1/2,-Y-1/2,-Z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:-X+1,Y-1/2,-Z+1/2->B:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:-X+1/2,-Y,Z-1/2->B:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:x,y,z->A:-X,Y-1/2,-Z+1/2	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:-X,Y-1/2,-Z+1/2->A:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:x,y,z->A:-X+1/2,-Y,Z-1/2	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:-X+1/2,-Y,Z-1/2->A:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:-X,Y-1/2,-Z+1/2->B:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6B1	A:x,y,z->B:-X+1,Y-1/2,-Z+1/2	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:x,y,z->A:X-1/2,-Y-1/2,-Z	RNA-binding domain, RBD	Interaction Interface Pymol
e3ns6A1	A:X-1/2,-Y-1/2,-Z->A:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol