Domain ID e3nteB2

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 000406763
Type: Automatic domain
Parent: e2pxrC1
Range: B:1-146
Ligands: FE I3M IOD NA
PDB: 3nte
PDB Description: HIV-1 capsid protein
UniProt: Q77YG1
Species: Human immunodeficiency virus 1

Structure of domain e3nteB2

Structural contacts of domain e3nteB2 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nteA1 B:x,y,z->A:X,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e3nteA2 B:x,y,z->A:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteA2 B:x,y,z->A:-X-1,Y-1/2,-Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteA2 B:x,y,z->A:-X-2,Y-1/2,-Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteA1 B:x,y,z->A:-X-1,Y-1/2,-Z+1 Retrovirus capsid protein-C Interaction Interface Pymol
e3nteA2 B:x,y,z->A:-X-1,Y-1/2,-Z+1 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteA2 B:x,y,z->A:X,Y-1,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteB2 B:x,y,z->B:-X-1,Y-1/2,-Z+1 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3nteB2 B:-X-1,Y-1/2,-Z+1->B:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol