Domain ID e3nvyC4

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  • A: a+b two layers
  • X: MocoBD/DmpA-related
  • H: MocoBD/DmpA-related
  • T: Molybdenum cofactor-binding domain
  • F: MoCoBD_1
UID: 001874209
Type: Automatic domain
Parent: e1v97A7
Range: C:694-954
Ligands: FES MOS MTE QUE
PDB: 3nvy
PDB Description: Xanthine dehydrogenase/oxidase
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e3nvyC4

Domains in the same chain:

e3nvyC2 C:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3nvyC4 C:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvyC3 C:955-1326 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e3nvyA2 A:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3nvyA1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3nvyB1 B:195-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3nvyB2 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3nvyC2 C:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3nvyC4 C:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvyC3 C:955-1326 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvyJ2 J:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3nvyJ1 J:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3nvyK2 K:224-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3nvyK1 K:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3nvyL2 L:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3nvyL4 L:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvyL3 L:955-1315 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e3nvyC4 of H-group "MocoBD/DmpA-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nvyA1 C:x,y,z->A:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol
e3nvyA2 C:x,y,z->A:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e3nvyB1 C:x,y,z->B:X,Y,Z FAD-binding domain Interaction Interface Pymol
e3nvyB1 C:X,Y-1,Z->B:x,y,z FAD-binding domain Interaction Interface Pymol
e3nvyA2 C:X,Y-1,Z->A:x,y,z Ubiquitin-related Interaction Interface Pymol
e3nvyC3 C:-X,Y-1/2,-Z->C:x,y,z MocoBD/DmpA-related Interaction Interface Pymol