Domain ID e3nwdB3

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  • A: beta complex topology
  • X: Viral glycoprotein ectodomain-like
  • H: Viral glycoprotein ectodomain-like
  • T: Viral glycoprotein ectodomain-like
  • F: Glycoprotein_B
UID: 001138644
Type: Automatic domain
Parent: e2gumA3
Range: B:105-138,B:485-725
Ligands: NAG
PDB: 3nwd
PDB Description: ENVELOPE GLYCOPROTEIN B
UniProt: P06437
Species:

Structure of domain e3nwdB3

Domains in the same chain:

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e3nwdB3 B:105-138,B:485-725 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e3nwdB2 B:139-152,B:365-484 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e3nwdB1 B:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins

Domains in the same PDB:

e3nwdA3 A:104-138,A:485-723 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e3nwdA2 A:139-152,A:365-484 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e3nwdA1 A:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins
e3nwdB3 B:105-138,B:485-725 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e3nwdB2 B:139-152,B:365-484 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e3nwdB1 B:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins
e3nwdC3 C:104-138,C:485-723 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e3nwdC2 C:139-152,C:365-484 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e3nwdC1 C:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins
e3nwdD3 D:104-138,D:485-725 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e3nwdD2 D:139-152,D:365-484 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e3nwdD1 D:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins

Structural contacts of domain e3nwdB3 of H-group "Viral glycoprotein ectodomain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nwdB2 B:x,y,z->B:-Y,X-Y-1,Z second barrel domain in viral glycoproteins Interaction Interface Pymol
e3nwdB3 B:x,y,z->B:-Y,X-Y-1,Z Viral glycoprotein ectodomain-like Interaction Interface Pymol
e3nwdB3 B:-Y,X-Y-1,Z->B:x,y,z Viral glycoprotein ectodomain-like Interaction Interface Pymol
e3nwdB2 B:-Y,X-Y-1,Z->B:x,y,z second barrel domain in viral glycoproteins Interaction Interface Pymol
e3nwdC2 B:x,y,z->C:-Y,X-Y-1,Z second barrel domain in viral glycoproteins Interaction Interface Pymol