| UID: | 001179397 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3pq1A1 |
| Range: | A:159-314 |
| PDB: | 3nyb |
| PDB Description: | Poly(A) RNA polymerase protein 2 |
| UniProt: | P53632 |
| Hsap BLAST neighbor: | Q5XG87 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e3nybA3
Domains in the same chain:
| e3nybA3 | A:159-314 | Nucleotidyltransferase-like | Nucleotidyltransferase | Nucleotidyltransferase |
| e3nybA4 | A:315-481 | HhH/H2TH | SAM/DNA-glycosylase | PAP/OAS1 substrate-binding domain |
Domains in the same PDB:
Structural contacts of domain e3nybA3 of H-group "Nucleotidyltransferase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3nybB1 | A:X,Y,Z->B:x,y,z | CCHC-type 1 zinc finger | Interaction Interface Pymol |
| e3nybA3 | A:x,y,z->A:X-Y,-Y,-Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybA4 | A:x,y,z->A:X-Y,-Y,-Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3nybA4 | A:X-Y,-Y,-Z->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3nybA3 | A:X-Y,-Y,-Z->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybA4 | A:x,y,z->A:-Y+1,X-Y,Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3nybA3 | A:x,y,z->A:-Y+1,X-Y,Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybA3 | A:-Y+1,X-Y,Z->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybA4 | A:-Y+1,X-Y,Z->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e3nybA3 | A:x,y,z->A:-X+2,-X+Y+1,-Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybA3 | A:-X+2,-X+Y+1,-Z->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e3nybB1 | A:X-Y,-Y,-Z-1->B:x,y,z | CCHC-type 1 zinc finger | Interaction Interface Pymol |
