Domain ID e3nyrA12

Download files:
  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: a+b domain in acetyl-CoA synthetase-like proteins
  • T: a+b domain in acetyl-CoA synthetase-like proteins
  • F: AMP-binding_C
UID: 001203722
Type: Automatic domain
Parent: e4isbA4
Range: A:387-471
Ligands: AMP MLC
PDB: 3nyr
PDB Description: Malonyl-CoA Ligase
UniProt: Q9L0A2
Hsap BLAST neighbor: Q08AH3
Species: Streptomyces coelicolor

Structure of domain e3nyrA12

Domains in the same chain:

e3nyrA11 A:4-135 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e3nyrA10 A:136-305 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e3nyrA9 A:306-386 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e3nyrA12 A:387-471 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Domains in the same PDB:

e3nyrA11 A:4-135 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e3nyrA10 A:136-305 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e3nyrA9 A:306-386 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e3nyrA12 A:387-471 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Structural contacts of domain e3nyrA12 of H-group "a+b domain in acetyl-CoA synthetase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nyrA9 A:x,y,z->A:X,-Y,-Z+1 beta-barrel domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e3nyrA10 A:x,y,z->A:X,-Y,-Z+1 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e3nyrA10 A:X,-Y,-Z+1->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e3nyrA9 A:X,-Y,-Z+1->A:x,y,z beta-barrel domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e3nyrA10 A:X-1/2,Y-1/2,Z->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e3nyrA11 A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol