ECOD: domain e3nzqB3

Domain ID e3nzqB3

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Orn_Arg_deC_N

UID:	001812418
Type:	Automatic domain
Parent:	e3n2oA2
Range:	B:93-369
Ligands:	SO4
PDB:	3nzq
PDB Description:	Biosynthetic arginine decarboxylase
UniProt:	P21170
Species:

Domain
In chain context
In PDB context

Structure of domain e3nzqB3

Domains in the same chain:

Download Pymol

e3nzqB1	B:39-92,B:370-383,B:482-604	cradle loop barrel	RIFT-related	Alanine racemase-C
e3nzqB3	B:93-369	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nzqB2	B:384-481	Spectrin repeat-like	Helical bundle domain in arginine decarboxylase	Helical bundle domain in arginine decarboxylase
e3nzqB4	B:605-657	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension

Domains in the same PDB:

e3nzqA4	A:39-92,A:370-383,A:482-604	cradle loop barrel	RIFT-related	Alanine racemase-C
e3nzqA3	A:93-369	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nzqA2	A:384-481	Spectrin repeat-like	Helical bundle domain in arginine decarboxylase	Helical bundle domain in arginine decarboxylase
e3nzqA1	A:605-657	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension
e3nzqB1	B:39-92,B:370-383,B:482-604	cradle loop barrel	RIFT-related	Alanine racemase-C
e3nzqB3	B:93-369	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3nzqB2	B:384-481	Spectrin repeat-like	Helical bundle domain in arginine decarboxylase	Helical bundle domain in arginine decarboxylase
e3nzqB4	B:605-657	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension	Arginine decarboxylase C-terminal helical extension

Structural contacts of domain e3nzqB3 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3nzqB1	B:x,y,z->B:-Y,-X,-Z-1/2	RIFT-related	Interaction Interface Pymol
e3nzqB3	B:x,y,z->B:-Y,-X,-Z-1/2	TIM barrels	Interaction Interface Pymol
e3nzqB3	B:-Y,-X,-Z-1/2->B:x,y,z	TIM barrels	Interaction Interface Pymol
e3nzqB1	B:-Y,-X,-Z-1/2->B:x,y,z	RIFT-related	Interaction Interface Pymol
e3nzqA2	B:x,y,z->A:-Y,-X,-Z-1/2	Helical bundle domain in arginine decarboxylase	Interaction Interface Pymol