Domain ID e3o6fB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000142574
Type: Automatic domain
Parent: e1k5nB1
Range: B:123-218
PDB: 3o6f
PDB Description: HLA class II histocompatibility antigen, DRB1-4 beta chain
UniProt: P13760
Hsap BLAST neighbor: P79483
Species: Homo sapiens

Structure of domain e3o6fB1

Domains in the same chain:

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e3o6fB2 B:1-117 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3o6fB1 B:123-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3o6fA2 A:4-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3o6fA1 A:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fB2 B:1-117 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3o6fB1 B:123-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fC1 C:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fC2 C:111-196 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fD4 D:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fD3 D:119-245 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fE2 E:2-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3o6fE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fF2 F:1-116 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3o6fF4 F:118-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fG1 G:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fG2 G:111-196 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fH4 H:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3o6fH3 H:119-243 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3o6fB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3o6fA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3o6fA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3o6fF4 B:x,y,z->F:X,Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e3o6fG1 B:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3o6fG2 B:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3o6fF4 B:x,y,z->F:-X+1,-Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e3o6fB1 B:x,y,z->B:-X+1,-Y,Z Immunoglobulin-related Interaction Interface Pymol
e3o6fB1 B:-X+1,-Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol