ECOD: domain e3o8bB8

Domain ID e3o8bB8

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: FMN-binding split barrel
F: Peptidase_S29

UID:	001233872
Type:	Automatic domain
Parent:	e1dy9.1
Range:	B:-15-183
Ligands:	ZN
PDB:	3o8b
PDB Description:	HCV NS3 PROTEASE/HELICASE
UniProt:	Q99AU2
Species:

Domain
In chain context
In PDB context

Structure of domain e3o8bB8

Domains in the same chain:

Download Pymol

e3o8bB8	B:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8bB6	B:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bB7	B:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bB5	B:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Domains in the same PDB:

e3o8bA8	A:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8bA6	A:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bA7	A:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bA5	A:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase
e3o8bB8	B:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8bB6	B:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bB7	B:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8bB5	B:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Structural contacts of domain e3o8bB8 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3o8bA7	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e3o8bA5	B:x,y,z->A:X,Y,Z	C-terminal helical domain of RNA helicase	Interaction Interface Pymol
e3o8bA8	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e3o8bA6	B:X-1,Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol