ECOD: domain e3o8dA6

Domain ID e3o8dA6

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Flavi_DEAD

UID:	001233810
Type:	Automatic domain
Parent:	e2bmfA2
Range:	A:184-325
Ligands:	ADP BEF MG SO4
PDB:	3o8d
PDB Description:	HCV NS3 PROTEASE/HELICASE
UniProt:	Q99AU2
Species:

Domain
In chain context
In PDB context

Structure of domain e3o8dA6

Domains in the same chain:

Download Pymol

e3o8dA8	A:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8dA6	A:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dA7	A:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dA5	A:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Domains in the same PDB:

e3o8dA8	A:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8dA6	A:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dA7	A:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dA5	A:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase
e3o8dB8	B:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8dB6	B:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dB7	B:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8dB5	B:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Structural contacts of domain e3o8dA6 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3o8dB6	A:-X+1/2,-Y+1,Z-1/2->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3o8dA5	A:-X,Y-1/2,-Z+1/2->A:x,y,z	C-terminal helical domain of RNA helicase	Interaction Interface Pymol
e3o8dB5	A:-X,Y-1/2,-Z+1/2->B:x,y,z	C-terminal helical domain of RNA helicase	Interaction Interface Pymol
e3o8dB8	A:x,y,z->B:X-1,Y,Z	RIFT-related	Interaction Interface Pymol