ECOD: domain e3o8rA8

Domain ID e3o8rA8

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: FMN-binding split barrel
F: Peptidase_S29

UID:	001233829
Type:	Automatic domain
Parent:	e1dy9.1
Range:	A:-15-183
Ligands:	ZN
PDB:	3o8r
PDB Description:	HCV NS3 PROTEASE/HELICASE
UniProt:	Q99AU2
Species:

Domain
In chain context
In PDB context

Structure of domain e3o8rA8

Domains in the same chain:

Download Pymol

e3o8rA8	A:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8rA6	A:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rA7	A:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rA5	A:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Domains in the same PDB:

e3o8rA8	A:-15-183	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8rA6	A:184-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rA7	A:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rA5	A:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase
e3o8rB8	B:-15-181	cradle loop barrel	RIFT-related	FMN-binding split barrel
e3o8rB6	B:182-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rB7	B:326-484	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3o8rB5	B:485-631	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase	C-terminal helical domain of RNA helicase

Structural contacts of domain e3o8rA8 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3o8rB5	A:X,Y,Z->B:x,y,z	C-terminal helical domain of RNA helicase	Interaction Interface Pymol
e3o8rB7	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3o8rB8	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e3o8rB7	A:x,y,z->B:X-1/2,-Y+3/2,-Z	P-loop domains-related	Interaction Interface Pymol
e3o8rA5	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	C-terminal helical domain of RNA helicase	Interaction Interface Pymol