Domain ID e3oasW1

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 000408175
Type: Automatic domain
Parent: e3j6bR1
Range: W:6-84
PDB: 3oas
PDB Description:
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e3oasW1

Domains in the same chain:

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e3oasW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e3oas01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3oas21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3oas31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3oas41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3oasC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3oasC2 C:125-271 SH3 SH3 SH3
e3oasE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3oasF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3oasG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3oasG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3oasH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3oasI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3oasI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3oasJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3oasK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3oasN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3oasO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3oasR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3oasS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3oasT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3oasU1 U:1-102 SH3 SH3 SH3
e3oasV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3oasW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3oasX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3oasY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3oasZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3oasW1 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3oasO1 W:x,y,z->O:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3oasO1 W:x,y,z->M:X,Y,Z Ribonuclease H-like Interaction Interface Pymol