Domain ID e3obaB5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000427105
Type: Automatic domain
Parent: e1jz8A5
Range: B:332-644
Ligands: MN3
PDB: 3oba
PDB Description: BETA-GALACTOSIDASE
UniProt: P00723
Hsap BLAST neighbor: P08236
Species: Kluyveromyces lactis

Structure of domain e3obaB5

Domains in the same chain:

Download Pymol

e3obaB7 B:2-205 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3obaB8 B:206-331 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaB5 B:332-644 TIM beta/alpha-barrel TIM barrels TIM barrels
e3obaB9 B:645-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaB6 B:728-1025 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e3obaA7 A:2-205 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3obaA8 A:206-331 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaA5 A:332-644 TIM beta/alpha-barrel TIM barrels TIM barrels
e3obaA9 A:645-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaA6 A:728-1025 Glycosyl hydrolase domain-like supersandwich supersandwich
e3obaB7 B:2-205 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3obaB8 B:206-331 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaB5 B:332-644 TIM beta/alpha-barrel TIM barrels TIM barrels
e3obaB9 B:645-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaB6 B:728-1025 Glycosyl hydrolase domain-like supersandwich supersandwich
e3obaC7 C:2-205 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3obaC8 C:206-331 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaC5 C:332-644 TIM beta/alpha-barrel TIM barrels TIM barrels
e3obaC9 C:645-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaC6 C:728-1025 Glycosyl hydrolase domain-like supersandwich supersandwich
e3obaD7 D:2-205 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3obaD8 D:206-331 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaD5 D:332-644 TIM beta/alpha-barrel TIM barrels TIM barrels
e3obaD9 D:645-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3obaD6 D:728-1025 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e3obaB5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3obaD6 B:X,Y,Z->D:x,y,z supersandwich Interaction Interface Pymol
e3obaA6 B:x,y,z->A:X,Y,Z supersandwich Interaction Interface Pymol
e3obaD8 B:x,y,z->D:X-1/2,-Y+1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e3obaD7 B:x,y,z->D:X-1/2,-Y+1/2,-Z Galactose-binding domain-like Interaction Interface Pymol
e3obaA7 B:-X,Y-1/2,-Z-1/2->A:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e3obaA8 B:-X,Y-1/2,-Z-1/2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol