ECOD: domain e3odgA1

Domain ID e3odgA1

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Peptidyl-tRNA hydrolase-like
T: Peptidyl-tRNA hydrolase-like
F: PNP_UDP_1

UID:	000140374
Type:	Automatic domain
Parent:	e3pnpA1
Range:	A:13-285
Ligands:	CL XAN
PDB:	3odg
PDB Description:	Xanthosine phosphorylase
UniProt:	Q66D48
Hsap BLAST neighbor:	P00491
Species:	Yersinia pseudotuberculosis

Structural contacts of domain e3odgA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3odgA1	A:x,y,z->A:-Y-1,X-Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:-Y-1,X-Y,Z->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:x,y,z->A:X-Y,X,Z-1/2	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:X-Y,X,Z-1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:x,y,z->A:-X-1,-Y-1,Z-1/2	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:-X-1,-Y-1,Z-1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:x,y,z->A:X-Y,X,Z+1/2	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:X-Y,X,Z+1/2->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:x,y,z->A:X,Y,Z-1	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e3odgA1	A:X,Y,Z-1->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol