Domain ID e3oeeM4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 001213827
Type: Automatic domain
Parent: e2jdiA3
Range: M:83-357
Ligands: ANP MG
PDB: 3oee
PDB Description: ATP SYNTHASE SUBUNIT BETA
UniProt: P00830
Hsap BLAST neighbor: P06576
Species: Saccharomyces cerevisiae

Structure of domain e3oeeM4

Domains in the same chain:

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e3oeeM1 M:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeM4 M:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeM5 M:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3oeeA1 A:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeA3 A:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeA2 A:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeB1 B:25-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeB3 B:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeB2 B:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeC1 C:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeC3 C:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeC2 C:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeD1 D:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeD4 D:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeD5 D:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeE1 E:8-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeE4 E:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeE5 E:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeF1 F:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeF4 F:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeF5 F:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeG1 G:1-276 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e3oeeH1 H:11-94 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e3oeeH2 H:95-136 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain
e3oeeI1 I:8-61 Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase
e3oeeJ1 J:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeJ3 J:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeJ2 J:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeK1 K:21-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeK3 K:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeK2 K:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeL1 L:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeL3 L:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeL2 L:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeM1 M:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeM4 M:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeM5 M:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeN1 N:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeN4 N:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeN5 N:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeO1 O:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeO4 O:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeO5 O:358-474 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeP1 P:1-276 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e3oeeQ1 Q:12-94 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e3oeeQ2 Q:95-137 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain
e3oeeS1 S:27-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeS3 S:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeS2 S:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeT1 T:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeT3 T:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeT2 T:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeU1 U:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeU3 U:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeU2 U:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeV1 V:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeV4 V:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeV5 V:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeW1 W:8-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeW4 W:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeW5 W:358-474 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeX1 X:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3oeeX4 X:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3oeeX5 X:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3oeeY1 Y:1-45,Y:77-178,Y:211-275 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit

Structural contacts of domain e3oeeM4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3oeeL2 M:x,y,z->L:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3oeeL3 M:x,y,z->L:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3oeeJ3 M:x,y,z->J:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3oeeJ1 M:x,y,z->J:X,Y,Z RIFT-related Interaction Interface Pymol
e3oeeP1 M:X,Y,Z->P:x,y,z ATP synthase (F1-ATPase), gamma subunit Interaction Interface Pymol
e3oeeS2 M:x,y,z->S:-X+1,Y-1/2,-Z+1 C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3oeeW5 M:x,y,z->W:-X+1,Y-1/2,-Z+1 C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol