| UID: | 000399348 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3pnpA1 |
| Range: | D:15-252 |
| Ligands: | DIH PO4 |
| PDB: | 3of3 |
| PDB Description: | Purine nucleoside phosphorylase deoD-type 1 |
| UniProt: | Q9KPM0 |
| Species: | Vibrio cholerae |
Structure of domain e3of3D1
Domains in the same chain:
| e3of3D1 | D:15-252 | Phosphorylase/hydrolase-like | Peptidyl-tRNA hydrolase-like | Peptidyl-tRNA hydrolase-like |
Domains in the same PDB:
Structural contacts of domain e3of3D1 of H-group "Peptidyl-tRNA hydrolase-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3of3L1 | D:X,Y,Z->L:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3B1 | D:x,y,z->B:X,Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3C1 | D:-X+1,Y-1/2,-Z+3/2->C:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3F1 | D:x,y,z->F:X-1/2,-Y+1/2,-Z+1 | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3K1 | D:X,Y,Z->K:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3E1 | D:X,Y,Z->E:x,y,z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
| e3of3C1 | D:x,y,z->C:X,Y,Z | Peptidyl-tRNA hydrolase-like | Interaction Interface Pymol |
