Domain ID e3ofdR1

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  • A: beta barrels
  • X: Ribosomal protein L21p
  • H: Ribosomal protein L21p
  • T: Ribosomal protein L21p
  • F: Ribosomal_L21p
UID: 000403183
Type: Automatic domain
Parent: e2j01V1
Range: R:1-103
PDB: 3ofd
PDB Description:
Species:

Structure of domain e3ofdR1

Domains in the same chain:

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e3ofdR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p

Domains in the same PDB:

e3ofd01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3ofd21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3ofd31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3ofd41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3ofdC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ofdC2 C:125-271 SH3 SH3 SH3
e3ofdE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3ofdF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3ofdG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ofdG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ofdH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3ofdI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3ofdI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3ofdJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3ofdK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3ofdN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3ofdO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ofdR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3ofdS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3ofdT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3ofdU1 U:1-102 SH3 SH3 SH3
e3ofdV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3ofdW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3ofdX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3ofdY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3ofdZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3ofdR1 of H-group "Ribosomal protein L21p":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2j01V1 R:x,y,z->Q:X,Y,Z Ribosomal protein L21p Interaction Interface Pymol
e2j01V1 R:x,y,z->L:X,Y,Z Ribosomal protein L21p Interaction Interface Pymol