Domain ID e3ofnV1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 000400574
Type: Automatic domain
Parent: e2jdiA3
Range: V:83-381
Ligands: ANP MG
PDB: 3ofn
PDB Description: ATP SYNTHASE SUBUNIT BETA
UniProt: P00830
Hsap BLAST neighbor: P06576
Species: Saccharomyces cerevisiae

Structure of domain e3ofnV1

Domains in the same chain:

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e3ofnV2 V:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnV1 V:83-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e3ofnA1 A:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnA3 A:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnA2 A:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnB1 B:25-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnB3 B:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnB2 B:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnC1 C:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnC3 C:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnC2 C:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnD1 D:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnD4 D:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnD5 D:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnE1 E:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnE4 E:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnE5 E:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnF1 F:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnF4 F:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnF5 F:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnG1 G:1-276 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e3ofnH2 H:10-94 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e3ofnH1 H:95-136 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain
e3ofnI1 I:4-61 Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase
e3ofnJ1 J:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnJ3 J:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnJ2 J:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnK1 K:21-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnK3 K:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnK2 K:382-507 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnL1 L:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnL3 L:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnL2 L:382-509 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnM1 M:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnM3 M:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnM2 M:358-466 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnN1 N:8-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnN3 N:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnN2 N:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnO1 O:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnO4 O:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnO5 O:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnP1 P:1-276 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e3ofnQ1 Q:11-89 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e3ofnQ2 Q:95-136 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain
e3ofnR1 R:4-61 Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase
e3ofnS1 S:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnS3 S:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnS2 S:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnT1 T:25-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnT3 T:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnT2 T:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnU1 U:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnU3 U:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnU2 U:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnV2 V:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnV1 V:83-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnW1 W:8-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnW4 W:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnW5 W:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnX1 X:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e3ofnX4 X:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3ofnX5 X:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3ofnY1 Y:1-41,Y:136-145,Y:213-276 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit

Structural contacts of domain e3ofnV1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ofnU3 V:x,y,z->U:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3ofnU2 V:x,y,z->U:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e3ofnS1 V:x,y,z->S:X,Y,Z RIFT-related Interaction Interface Pymol
e3ofnS3 V:x,y,z->S:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3ofnY1 V:X,Y,Z->Y:x,y,z ATP synthase (F1-ATPase), gamma subunit Interaction Interface Pymol
e3ofnB2 V:X-1,Y,Z-1->B:x,y,z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol